![]() In addition to the binaries you can also download the DISCOVAR source code for the benchmark test release. If you encounter problems please let us know via the user forum. We recommend you try running the binary test first – it is statically linked with all the required dependencies, and also includes SAMtools. proc/version – kernel version number, build name, etc. proc/loadavg – information about the load average proc/cpuinfo – information about the microprocessors in the system This file contains the runtime benchmarking information, plus the following: Note that no information about users or jobs running on the system is collected, and nothing is transmitted back to us – other than the contents of the LOGFILE.txt file that you send us. Please also include a description of your hardware. Send us the result by posting the LOGFILE.txt file produced by the test to this thread on the forum. On laptops, some i5s are not real quad cores but dual cores with Hyperthreading. The test does not require large amounts of memory or produce a heavy IO burden. All i3s and i7s do have Hyperthreading, as do new Kaby Lake Pentiums (G4560, 4600, 4620). The heart of the test is a short DISCOVAR example, which is run 10 times in order to compute a mean and standard deviation. The runtime will depend on your hardware, but we estimate it should take around 2 hours. The benchmark test needs to be done on a server that has essentially no other user processes running during the duration of the test. For your convenience we have provided statically compiled binaries, but also the source code if you wish to build it yourself. Running the benchmark testĭownload the benchmarking test and run it on your hardware. ![]() Note that we cannot include prices as they are generally confidential. ![]() We will update this table when we obtain new information. † total cores (processors x physical cores x logical cores) chipset clockspeed In the meantime, here is the table so far. Compare products including processors, desktop boards. If you would like to participate, please follow the instructions given below. Intel product specifications, features and compatibility quick reference guide and code name decoder. This will help us, and hopefully you too, when deciding on future hardware purchases or determining if existing servers are running efficiently. We would like to generate a table comparing performance statistics, based on a benchmarking test we have designed. strobealign StaphylococcusLT963435.fasta > outputStaphreads.sam Using k: 20 s: 16 wmin: 5 wmax: 11 Read length (r): 129 Maximum seed len. We are gathering data on the performance of DISCOVAR on different servers and under different configurations, and we are looking to you to help. Would you like to help us benchmark servers?
0 Comments
Leave a Reply. |
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |